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PepBank
Massachusetts General Hospital
,
Harvard University
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Smith-Waterman Search
(Search for similar sequences)
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public
Enter sequence below in FASTA format ('>' is mandatory)
Example:
>my_sequence_name_A Some optional description of A
GETRAPL
>my_sequence_name_B Some optional description of B
SVSVGMKPSPRP
Note: Number of sequences is limited to 100
E()
0.0001
0.001
0.01
0.1
1.0
10.0
100.0
1000.0
10000.0
Matrix
BLOSUM50
BLOSUM62
BLOSUM80
MDM10
MDM20
MDM40
PAM120
PAM250
Other advanced options
Example: -f 6
PepBank has been developed and is maintained by
http://ric.csb.mgh.harvard.edu
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